Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925904.1_cds_XP_016474075.1_66137
CDS Infomation

[gene=LOC107795884] [db_xref=GeneID:107795884] [protein=auxin response factor 9-like] [protein_id=XP_016474075.1] [location=join(12107..12220,12323..12418,12536..12592,12789..12941,13208..13292,13422..13512,13637..13801,13902..14015,14104..14176,14263..14410,14507..15111,15205..15392,15593..15740)] [gbkey=CDS]
Sequence

ATGGGAAGTGATGATATGTATACAGAGCTGTGGAAAGCTTGTGCTGGGCCTTTAGTGGAT
GTTCCTAGGACTGGAGAACGAGTTTACTACTTTCCACAGGGTCACATAGAACAATTAGAG
GCATCGACAAATCAAGCTCTGAAACAACAAATTCCTCAATTTAGTCTTCCTTCAAAGATA
CTCTGTCGCGTTGTTCATGTCCAGTTACTGGCAGAGACAGAGACTGATGAGGTCTATGCC
CAGATCACTTTGCACCCTGAGGCAATGCAAGAAGAACCGTCTAGTCCTGATCCATGCCCA
CCTGATCTGCCAAAACATGCGGTTCATTCGTTCTGTAAAATTTTAACAGCATCAGATACA
AGCACACATGGAGGATTTTCTGTTCTTCGGAAGCACGCCAATGAATGTCTCCCACCACTG
GACATGACTCAGTCGACTCCGACCCAAGATTTGGTCGCCAAAGATCTTCATGGGTATGAG
TGGCGATTTAAGCATATCTTTAGAGGCCAACCTCGAAGACACTTGCTTACTACTGGATGG
AGTACATTTGTAACTTCCAAGAGATTAGTTGCCGGTGATGCTTTTGTATTCCTGAGGGGT
GATAATGGAGATCTGCGTGTTGGGGTTCGACATCTTGCTCGGCAGCAAAGCCATATGCCA
CAATCTGTGATATCCAGCCAAAATATGCATCTTGGTGTTCTTGCGACTGCATCTCATGCT
ATTACAACACAAACACTGTTTGTTGTATATTATAAGCCAAGGACAAGCCAATTTATAATC
GGATTAAACAAGTATCTGGAGGCTGTGAGTCATGGGTTCTCAGTAGGTATGCGTTTCAGG
ATGAGGTTTGAAGGCGAAGATTCTCCTGAAAGAAGGTTCACAGGAACGATAGTTGGAGTT
GGTGACATTTCCTCGCAATGGTCAGAATCTAAATGGCGATCATTGAAGATTCAATGGGAT
GAACCAGCATCCATAGTGAGGCCAGACAGGGTTTCGCCATGGGAGATAGAGCCTTTTGTT
GCTCCTACTTCTTTAGATGTTGCACAACCAGGAATAAAGATCAAACGACCTCGTCCCCTT
GAGCTTCCCCACACTGACATTTCAGCTGCCACTGCTGCTTCTTCATTCTGGTACCCTGGA
TCTGGTCCTACTCTTGAAGTGAGCCACTTAGGTAGTGTTGCTGATAACCAACTATACTGG
TCTTCGGAGCAGAATAACAGCCTCTCCAATGGCGTGAGCAACACTAGCTGTAGGACTCAT
CTCAGTGGAGCTTGGCAGCATAGCATGCTTGCAAATGGTCCCCTCAATATGCTCCGAGAC
TCTATTGAAGACAACAAGCAGCTGACTGCACAATCAATTCTGTTGGATTACGGTTCTCCG
ATGTCATCAAGGGCAAGTAACGGCCTTTTACTTGACCAAGTGAATAGGGGTAATAAGCAT
GCCATCTCTTCTACTTGTCGCTTATTTGGCATTGACTTGCGGAACAACTCTAATAATACC
CCTACCAGTGAGAAAGACCCACCTAATGTTACATCCAACTGCGCTGATGGCGCACCTACT
GTGCATGATGGATCCGAAGTTGATAAGGACCAAAATGTAGAGCATCTAAATCCTTCTGAA
GAAAAGAAACAAGTCCAATTGGAGGCACTACTGAACGATACACATAAGCAGGGCGTCACT
TCATCAAGAACTCGTACTAAGGTGCAAATGCAAGGGGTTCGTGTTGGACGCGCTGTTGAC
TTGACTGGTTTAAGTGGTTATGATGATCTTATCAGTGAACTGGAGAAGATATTTGATATT
AAGGGAGAGCTTTGCCCTCGAAACAAATGGGAAGTTGTGTATACAGATGATGAGGGTGAC
ATGATGCTTGTGGGGGATGATCCATGGCTGGAGTTCTGTAAGATGGTCAAGAGGATATTT
ATATATTCGAGTGAGGAAGTGAAGAAGATGAGTCCTAGATGTAAGCTTCCTATTTTATCA
TTAGAAGGTGAAGGGACAATGCCAAGTGTAGATTCAGAGCTAAAATCTGAAAGATGA

Peptide Sequence

PEP ID

XP_016474075.1
PEP Infomation

PREDICTED: auxin response factor 9-like [Nicotiana tabacum]
Sequence

MGSDDMYTELWKACAGPLVDVPRTGERVYYFPQGHIEQLEASTNQALKQQIPQFSLPSKI
LCRVVHVQLLAETETDEVYAQITLHPEAMQEEPSSPDPCPPDLPKHAVHSFCKILTASDT
STHGGFSVLRKHANECLPPLDMTQSTPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGW
STFVTSKRLVAGDAFVFLRGDNGDLRVGVRHLARQQSHMPQSVISSQNMHLGVLATASHA
ITTQTLFVVYYKPRTSQFIIGLNKYLEAVSHGFSVGMRFRMRFEGEDSPERRFTGTIVGV
GDISSQWSESKWRSLKIQWDEPASIVRPDRVSPWEIEPFVAPTSLDVAQPGIKIKRPRPL
ELPHTDISAATAASSFWYPGSGPTLEVSHLGSVADNQLYWSSEQNNSLSNGVSNTSCRTH
LSGAWQHSMLANGPLNMLRDSIEDNKQLTAQSILLDYGSPMSSRASNGLLLDQVNRGNKH
AISSTCRLFGIDLRNNSNNTPTSEKDPPNVTSNCADGAPTVHDGSEVDKDQNVEHLNPSE
EKKQVQLEALLNDTHKQGVTSSRTRTKVQMQGVRVGRAVDLTGLSGYDDLISELEKIFDI
KGELCPRNKWEVVYTDDEGDMMLVGDDPWLEFCKMVKRIFIYSSEEVKKMSPRCKLPILS
LEGEGTMPSVDSELKSER

Transcript Sequence

Gene sequence data has not been registered.